J3_9HLZ_018

3D structure

PDB id

9HLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AUA*UCUA*UUUUAAU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HLZ|1|AA|A|2971
9HLZ|1|AA|U|2972
9HLZ|1|AA|A|2973
*
9HLZ|1|AA|U|3013
9HLZ|1|AA|C|3014
9HLZ|1|AA|U|3015
9HLZ|1|AA|A|3016
*
9HLZ|1|AA|U|3029
9HLZ|1|AA|U|3030
9HLZ|1|AA|U|3031
9HLZ|1|AA|U|3032
9HLZ|1|AA|A|3033
9HLZ|1|AA|A|3034
9HLZ|1|AA|U|3035

Current chains

Chain AA

21S mitochondrial rRNA

Nearby chains

Chain LL

Large ribosomal subunit protein bL17m

Chain TT

Large ribosomal subunit protein uL29m

Chain dd

Large ribosomal subunit protein mL67