J3_9HLZ_022

3D structure

PDB id

9HLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGAU*AAAU*AAUAAAA

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HLZ|1|r|U|412
9HLZ|1|r|G|413
9HLZ|1|r|A|414
9HLZ|1|r|U|415
*
9HLZ|1|r|A|487
9HLZ|1|r|A|488
9HLZ|1|r|A|489
9HLZ|1|r|U|490
*
9HLZ|1|r|A|499
9HLZ|1|r|A|500
9HLZ|1|r|U|501
9HLZ|1|r|A|502
9HLZ|1|r|A|503
9HLZ|1|r|A|504
9HLZ|1|r|A|505

Current chains

Chain r

15S mitochondrial rRNA

Nearby chains

Chain 6

Small ribosomal subunit protein mS45

Chain D

Small ribosomal subunit protein uS4m