J3_9HLZ_025

3D structure

PDB id

9HLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AA*UAAUAUAUG*UAU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HLZ|1|r|A|737
9HLZ|1|r|A|738
*
9HLZ|1|r|U|783
9HLZ|1|r|A|784
9HLZ|1|r|A|785
9HLZ|1|r|U|786
9HLZ|1|r|A|787
9HLZ|1|r|U|788
9HLZ|1|r|A|789
9HLZ|1|r|U|790
9HLZ|1|r|G|791
*
9HLZ|1|r|U|798
9HLZ|1|r|A|799
9HLZ|1|r|U|800

Current chains

Chain r

15S mitochondrial rRNA

Nearby chains

Chain F

Small ribosomal subunit protein bS6m

Chain K

Small ribosomal subunit protein uS11m

Chain R

Small ribosomal subunit protein bS18m

Chain T

Small ribosomal subunit protein bS21m