J3_9HLZ_034

3D structure

PDB id

9HLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CAU*AAUU*AGAAAG

Length

13 nucleotides

Bulged bases

9HLZ|1|r|U|1189, 9HLZ|1|r|A|1216

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HLZ|1|r|C|1162
9HLZ|1|r|A|1163
9HLZ|1|r|U|1164
*
9HLZ|1|r|A|1187
9HLZ|1|r|A|1188
9HLZ|1|r|U|1189
9HLZ|1|r|U|1190
*
9HLZ|1|r|A|1212
9HLZ|1|r|G|1213
9HLZ|1|r|A|1214
9HLZ|1|r|A|1215
9HLZ|1|r|A|1216
9HLZ|1|r|G|1217

Current chains

Chain r

15S mitochondrial rRNA

Nearby chains

Chain C

Small ribosomal subunit protein uS3m

Chain I

Small ribosomal subunit protein uS9m

Chain J

Small ribosomal subunit protein uS10m

Chain N

Small ribosomal subunit protein uS14m