J3_9HM0_007

3D structure

PDB id

9HM0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUAAAA*UAAG*UGAAG

Length

15 nucleotides

Bulged bases

9HM0|1|AA|A|1333

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HM0|1|AA|C|1329
9HM0|1|AA|U|1330
9HM0|1|AA|A|1331
9HM0|1|AA|A|1332
9HM0|1|AA|A|1333
9HM0|1|AA|A|1334
*
9HM0|1|AA|U|1577
9HM0|1|AA|A|1578
9HM0|1|AA|A|1579
9HM0|1|AA|G|1580
*
9HM0|1|AA|U|1590
9HM0|1|AA|G|1591
9HM0|1|AA|A|1592
9HM0|1|AA|A|1593
9HM0|1|AA|G|1594

Current chains

Chain AA

21S mitochondrial rRNA

Nearby chains

Chain dd

Large ribosomal subunit protein mL67