J3_9HM0_018

3D structure

PDB id

9HM0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AUA*UCUA*UUUUAAU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HM0|1|AA|A|2971
9HM0|1|AA|U|2972
9HM0|1|AA|A|2973
*
9HM0|1|AA|U|3013
9HM0|1|AA|C|3014
9HM0|1|AA|U|3015
9HM0|1|AA|A|3016
*
9HM0|1|AA|U|3029
9HM0|1|AA|U|3030
9HM0|1|AA|U|3031
9HM0|1|AA|U|3032
9HM0|1|AA|A|3033
9HM0|1|AA|A|3034
9HM0|1|AA|U|3035

Current chains

Chain AA

21S mitochondrial rRNA

Nearby chains

Chain LL

Large ribosomal subunit protein bL17m

Chain TT

Large ribosomal subunit protein uL29m

Chain dd

Large ribosomal subunit protein mL67