J3_9HM0_030
3D structure
- PDB id
- 9HM0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UUUGAAU*ACAG*CUUAUA
- Length
- 17 nucleotides
- Bulged bases
- 9HM0|1|r|A|1059
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9HM0|1|r|U|1055
9HM0|1|r|U|1056
9HM0|1|r|U|1057
9HM0|1|r|G|1058
9HM0|1|r|A|1059
9HM0|1|r|A|1060
9HM0|1|r|U|1061
*
9HM0|1|r|A|1091
9HM0|1|r|C|1092
9HM0|1|r|A|1093
9HM0|1|r|G|1094
*
9HM0|1|r|C|1242
9HM0|1|r|U|1243
9HM0|1|r|U|1244
9HM0|1|r|A|1245
9HM0|1|r|U|1246
9HM0|1|r|A|1247
Current chains
- Chain r
- 15S mitochondrial rRNA
Nearby chains
- Chain 7
- Small ribosomal subunit protein mS46
- Chain C
- Small ribosomal subunit protein uS3m
- Chain N
- Small ribosomal subunit protein uS14m
- Chain X
- Small ribosomal subunit protein mS33
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