J3_9HM0_031
3D structure
- PDB id
- 9HM0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UCUUUAG*CAAAACU*AAUUAAGA
- Length
- 22 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9HM0|1|r|U|1109
9HM0|1|r|C|1110
9HM0|1|r|U|1111
9HM0|1|r|U|1112
9HM0|1|r|U|1113
9HM0|1|r|A|1114
9HM0|1|r|G|1115
*
9HM0|1|r|C|1154
9HM0|1|r|A|1155
9HM0|1|r|A|1156
9HM0|1|r|A|1157
9HM0|1|r|A|1158
9HM0|1|r|C|1159
9HM0|1|r|U|1160
*
9HM0|1|r|A|1219
9HM0|1|r|A|1220
9HM0|1|r|U|1221
9HM0|1|r|U|1222
9HM0|1|r|A|1223
9HM0|1|r|A|1224
9HM0|1|r|G|1225
9HM0|1|r|A|1226
Current chains
- Chain r
- 15S mitochondrial rRNA
Nearby chains
- Chain C
- Small ribosomal subunit protein uS3m
- Chain E
- Small ribosomal subunit protein uS5m
- Chain I
- Small ribosomal subunit protein uS9m
- Chain J
- Small ribosomal subunit protein uS10m
- Chain N
- Small ribosomal subunit protein uS14m
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