J3_9HUS_018

3D structure

PDB id

9HUS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of WT E.coli ribosome with complexed filament nascent chain at length 31, with P-site tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GAAC*GUUGAU*AAUGAAC

Length

17 nucleotides

Bulged bases

9HUS|1|b|U|2833, 9HUS|1|b|A|2835, 9HUS|1|b|U|2884, 9HUS|1|b|G|2885

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HUS|1|b|G|2812
9HUS|1|b|A|2813
9HUS|1|b|A|2814
9HUS|1|b|C|2815
*
9HUS|1|b|G|2831
9HUS|1|b|U|2832
9HUS|1|b|U|2833
9HUS|1|b|G|2834
9HUS|1|b|A|2835
9HUS|1|b|U|2836
*
9HUS|1|b|A|2882
9HUS|1|b|A|2883
9HUS|1|b|U|2884
9HUS|1|b|G|2885
9HUS|1|b|A|2886
9HUS|1|b|A|2887
9HUS|1|b|C|2888

Current chains

Chain b

23S rRNA

Nearby chains

Chain 3

Large ribosomal subunit protein bL32

Chain d

50S ribosomal protein L3

Chain n

Large ribosomal subunit protein bL17

Chain s

Large ribosomal subunit protein uL22