J3_9I1W_012

3D structure

PDB id

9I1W (explore in PDB, NAKB, or RNA 3D Hub)

Description

High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

GACGG*CGCUAAGG*CAC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I1W|1|1|G|1213
9I1W|1|1|A|1214
9I1W|1|1|C|1215
9I1W|1|1|G|1216
9I1W|1|1|G|1217
*
9I1W|1|1|C|1238
9I1W|1|1|G|1239
9I1W|1|1|C|1240
9I1W|1|1|U|1241
9I1W|1|1|A|1242
9I1W|1|1|A|1243
9I1W|1|1|G|1244
9I1W|1|1|G|1245
*
9I1W|1|1|C|1260
9I1W|1|1|A|1261
9I1W|1|1|C|1262

Current chains

Chain 1

26S rRNA

Nearby chains

Chain LK

60S ribosomal protein L12-like protein

Chain Ls

60S acidic ribosomal protein P0