J3_9I1W_018
3D structure
- PDB id
- 9I1W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High resolution structure of the thermophilic 60S ribosomal subunit of Chaetomium thermophilum
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.38 Å
Loop
- Sequence
- AUUG*CUUAUU*AAGACAU(PSU)
- Length
- 18 nucleotides
- Bulged bases
- 9I1W|1|1|U|2477
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9I1W|1|1|A|2395
9I1W|1|1|U|2396
9I1W|1|1|U|2397
9I1W|1|1|G|2398
*
9I1W|1|1|C|2475
9I1W|1|1|U|2476
9I1W|1|1|U|2477
9I1W|1|1|A|2478
9I1W|1|1|U|2479
9I1W|1|1|U|2480
*
9I1W|1|1|A|2549
9I1W|1|1|A|2550
9I1W|1|1|G|2551
9I1W|1|1|A|2552
9I1W|1|1|C|2553
9I1W|1|1|A|2554
9I1W|1|1|U|2555
9I1W|1|1|PSU|2556
Current chains
- Chain 1
- 26S rRNA
Nearby chains
- Chain LA
- 60S ribosomal protein L2-like protein
- Chain LG
- 60S ribosomal protein L8
- Chain LN
- Ribosomal protein L15
- Chain Li
- 60S ribosomal protein L36
Coloring options: