J3_9I2E_008

3D structure

PDB id

9I2E (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human ribosome (combined translational states)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.95 Å

Loop

Sequence

UGAACUA*UAG*CGAA

Length

14 nucleotides

Bulged bases

9I2E|1|L5|A|1534, 9I2E|1|L5|G|1641, 9I2E|1|L5|A|1642

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I2E|1|L5|U|1531
9I2E|1|L5|G|1532
9I2E|1|L5|A|1533
9I2E|1|L5|A|1534
9I2E|1|L5|C|1535
9I2E|1|L5|U|1536
9I2E|1|L5|A|1537
*
9I2E|1|L5|U|1622
9I2E|1|L5|A|1623
9I2E|1|L5|G|1624
*
9I2E|1|L5|C|1640
9I2E|1|L5|G|1641
9I2E|1|L5|A|1642
9I2E|1|L5|A|1643

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LA

60S ribosomal protein L8

Chain LN

60S ribosomal protein L15

Chain Lj

60S ribosomal protein L37

Chain Ll

60S ribosomal protein L39