J3_9I2E_016

3D structure

PDB id

9I2E (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human ribosome (combined translational states)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.95 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

9I2E|1|L5|U|2763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I2E|1|L5|A|2551
9I2E|1|L5|G|2552
9I2E|1|L5|A|2553
9I2E|1|L5|U|2554
9I2E|1|L5|G|2555
*
9I2E|1|L5|C|2572
9I2E|1|L5|A|2573
9I2E|1|L5|G|2574
9I2E|1|L5|U|2575
*
9I2E|1|L5|A|2757
9I2E|1|L5|G|2758
9I2E|1|L5|G|2759
9I2E|1|L5|G|2760
9I2E|1|L5|U|2761
9I2E|1|L5|G|2762
9I2E|1|L5|U|2763
9I2E|1|L5|A|2764
9I2E|1|L5|A|2765
9I2E|1|L5|A|2766
9I2E|1|L5|U|2767

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LZ

60S ribosomal protein L27