J3_9I3L_018

3D structure

PDB id

9I3L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome with filamin mutant Y719E nascent chain at linker length of 47 amino acids, with tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAUC*GUGAUG*CCAUUUAAAG

Length

20 nucleotides

Bulged bases

9I3L|1|b|A|2522, 9I3L|1|b|U|2523

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I3L|1|b|C|2521
9I3L|1|b|A|2522
9I3L|1|b|U|2523
9I3L|1|b|C|2524
*
9I3L|1|b|G|2549
9I3L|1|b|U|2550
9I3L|1|b|G|2551
9I3L|1|b|A|2552
9I3L|1|b|U|2553
9I3L|1|b|G|2554
*
9I3L|1|b|C|2562
9I3L|1|b|C|2563
9I3L|1|b|A|2564
9I3L|1|b|U|2565
9I3L|1|b|U|2566
9I3L|1|b|U|2567
9I3L|1|b|A|2568
9I3L|1|b|A|2569
9I3L|1|b|A|2570
9I3L|1|b|G|2571

Current chains

Chain b

23S rRNA

Nearby chains

Chain d

50S ribosomal protein L3

Chain k

Large ribosomal subunit protein uL14