J3_9I3L_020
3D structure
- PDB id
- 9I3L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome with filamin mutant Y719E nascent chain at linker length of 47 amino acids, with tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAAC*GUUGAU*AAUGAAC
- Length
- 17 nucleotides
- Bulged bases
- 9I3L|1|b|U|2837, 9I3L|1|b|A|2839, 9I3L|1|b|U|2888, 9I3L|1|b|G|2889
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9I3L|1|b|G|2816
9I3L|1|b|A|2817
9I3L|1|b|A|2818
9I3L|1|b|C|2819
*
9I3L|1|b|G|2835
9I3L|1|b|U|2836
9I3L|1|b|U|2837
9I3L|1|b|G|2838
9I3L|1|b|A|2839
9I3L|1|b|U|2840
*
9I3L|1|b|A|2886
9I3L|1|b|A|2887
9I3L|1|b|U|2888
9I3L|1|b|G|2889
9I3L|1|b|A|2890
9I3L|1|b|A|2891
9I3L|1|b|C|2892
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain 3
- Large ribosomal subunit protein bL32
- Chain d
- 50S ribosomal protein L3
- Chain n
- Large ribosomal subunit protein bL17
- Chain s
- Large ribosomal subunit protein uL22
Coloring options: