J3_9I5V_009

3D structure

PDB id

9I5V (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S P. gingivalis ribosome erm-delta-porN strain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UCGGGGC*GAAGAAC*GUA

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I5V|1|A|U|1373
9I5V|1|A|C|1374
9I5V|1|A|G|1375
9I5V|1|A|G|1376
9I5V|1|A|G|1377
9I5V|1|A|G|1378
9I5V|1|A|C|1379
*
9I5V|1|A|G|1410
9I5V|1|A|A|1411
9I5V|1|A|A|1412
9I5V|1|A|G|1413
9I5V|1|A|A|1414
9I5V|1|A|A|1415
9I5V|1|A|C|1416
*
9I5V|1|A|G|1431
9I5V|1|A|U|1432
9I5V|1|A|A|1433

Current chains

Chain A

23S rRNA

Nearby chains

Chain W

Large ribosomal subunit protein uL23