J3_9IOT_029

3D structure

PDB id

9IOT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Escherichia coli hibernating ribosome with RNase I mutant

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CUUG*CAG*CUUACG

Length

13 nucleotides

Bulged bases

9IOT|1|a|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9IOT|1|a|C|990
9IOT|1|a|U|991
9IOT|1|a|U|992
9IOT|1|a|G|993
*
9IOT|1|a|C|1045
9IOT|1|a|A|1046
9IOT|1|a|G|1047
*
9IOT|1|a|C|1210
9IOT|1|a|U|1211
9IOT|1|a|U|1212
9IOT|1|a|A|1213
9IOT|1|a|C|1214
9IOT|1|a|G|1215

Current chains

Chain a

16S rRNA

Nearby chains

Chain n

Small ribosomal subunit protein uS14