J3_9J1M_031
3D structure
- PDB id
- 9J1M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- KU13-bond Mycobacterium tuberculosis 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.33 Å
Loop
- Sequence
- UUUGACAU*GCAG*CUUAUG
- Length
- 18 nucleotides
- Bulged bases
- 9J1M|1|a|U|1206
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9J1M_031 not in the Motif Atlas
- Geometric match to J3_6CZR_063
- Geometric discrepancy: 0.2557
- The information below is about J3_6CZR_063
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_76475.1
- Basepair signature
- cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW
- Number of instances in this motif group
- 3
Unit IDs
9J1M|1|a|U|983
9J1M|1|a|U|984
9J1M|1|a|U|985
9J1M|1|a|G|986
9J1M|1|a|A|987
9J1M|1|a|C|988
9J1M|1|a|A|989
9J1M|1|a|U|990
*
9J1M|1|a|G|1035
9J1M|1|a|C|1036
9J1M|1|a|A|1037
9J1M|1|a|G|1038
*
9J1M|1|a|C|1202
9J1M|1|a|U|1203
9J1M|1|a|U|1204
9J1M|1|a|A|1205
9J1M|1|a|U|1206
9J1M|1|a|G|1207
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain c
- Small ribosomal subunit protein uS3
- Chain n
- Small ribosomal subunit protein uS14B
Coloring options: