J3_9K0Z_013
3D structure
- PDB id
- 9K0Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EF-G2 bound 70S ribosome complex of M. smegmatis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- UG*UGUU*GCAA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9K0Z_013 not in the Motif Atlas
- Geometric match to J3_4LFB_017
- Geometric discrepancy: 0.113
- The information below is about J3_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_11018.1
- Basepair signature
- cWW-cWW-tSS-F-F-cWW-F
- Number of instances in this motif group
- 2
Unit IDs
9K0Z|1|A|U|1053
9K0Z|1|A|G|1054
*
9K0Z|1|A|U|1063
9K0Z|1|A|G|1064
9K0Z|1|A|U|1065
9K0Z|1|A|U|1066
*
9K0Z|1|A|G|1079
9K0Z|1|A|C|1080
9K0Z|1|A|A|1081
9K0Z|1|A|A|1082
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain E
- Small ribosomal subunit protein uS5
- Chain V
- Small ribosomal subunit protein uS2
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