J3_9K0Z_034

3D structure

PDB id

9K0Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

EF-G2 bound 70S ribosome complex of M. smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

GCC*GACUAGUGAUCC*GCUCAAC

Length

22 nucleotides

Bulged bases

9K0Z|1|h|U|2614, 9K0Z|1|h|A|2650

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9K0Z|1|h|G|2506
9K0Z|1|h|C|2507
9K0Z|1|h|C|2508
*
9K0Z|1|h|G|2608
9K0Z|1|h|A|2609
9K0Z|1|h|C|2610
9K0Z|1|h|U|2611
9K0Z|1|h|A|2612
9K0Z|1|h|G|2613
9K0Z|1|h|U|2614
9K0Z|1|h|G|2615
9K0Z|1|h|A|2616
9K0Z|1|h|U|2617
9K0Z|1|h|C|2618
9K0Z|1|h|C|2619
*
9K0Z|1|h|G|2645
9K0Z|1|h|C|2646
9K0Z|1|h|U|2647
9K0Z|1|h|C|2648
9K0Z|1|h|A|2649
9K0Z|1|h|A|2650
9K0Z|1|h|C|2651

Current chains

Chain h

23S ribosomal RNA

Nearby chains

Chain X

Large ribosomal subunit protein bL27

Chain c

Large ribosomal subunit protein bL33A

Chain e

Large ribosomal subunit protein bL35

Chain s

Large ribosomal subunit protein uL15