J3_9K30_001

3D structure

PDB id

9K30 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the TbaIscB-omega RNA-target DNA complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.17 Å

Loop

Sequence

CUA*UACC*GUUG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9K30|1|B|C|163
9K30|1|B|U|164
9K30|1|B|A|165
*
9K30|1|B|U|201
9K30|1|B|A|202
9K30|1|B|C|203
9K30|1|B|C|204
*
9K30|1|B|G|349
9K30|1|B|U|350
9K30|1|B|U|351
9K30|1|B|G|352

Current chains

Chain B

Omega RNA

Nearby chains

Chain A

TbaIscB