J3_9LKF_001

3D structure

PDB id

9LKF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Guanine-II riboswitch in complex with guanosine

Experimental method

X-RAY DIFFRACTION

Resolution

2.83 Å

Loop

Sequence

AU*AC*GGCU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_52780.1

Basepair signature

cWW-cWW-F-F-cWW

Number of instances in this motif group

3

Unit IDs

9LKF|1|A|A|8
9LKF|1|A|U|9
*
9LKF|1|A|A|39
9LKF|1|A|C|40
*
9LKF|1|A|G|62
9LKF|1|A|G|63
9LKF|1|A|C|64
9LKF|1|A|U|65

Current chains

Chain A

PRTg (71-MER)

Nearby chains