Motif J3_52780.1 Version J3_52780.1 of this group appears in releases 4.4 to 4.4
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | break | 3 | 4 | break | 5 | 6 | 7 | 8 | 1-8 | 2-3 | 4-5 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_9V4U_001 | 9V4U | 0.1341 | 0 | A | Purine riboswitch | A | 8 | U | 9 | * | A | 39 | C | 40 | * | G | 62 | G | 63 | C | 64 | U | 65 | cWW | cWW | cWW |
| 2 | J3_9LKE_001 | 9LKE | 0.0000 | 0 | A | Purine riboswitch | A | 8 | U | 9 | * | A | 39 | C | 40 | * | G | 62 | G | 63 | C | 64 | U | 65 | cWW | cWW | cWW |
| 3 | J3_9LKF_001 | 9LKF | 0.1577 | 0 | A | Purine riboswitch | A | 8 | U | 9 | * | A | 39 | C | 40 | * | G | 62 | G | 63 | C | 64 | U | 65 | cWW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AU*AC*GGCU | 3 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| **GC | 3 |
Release history
| Release | 4.4 |
|---|---|
| Date | 2025-12-03 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-cWW-F-F-cWW
- Heat map statistics
- Min 0.13 | Avg 0.11 | Max 0.21
Coloring options: