J3_9M0P_036

3D structure

PDB id

9M0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of human 80S ribosome in complex with montanine

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

CACUG*CGUGAUGG*CGAG

Length

17 nucleotides

Bulged bases

9M0P|1|S2|U|1535, 9M0P|1|S2|G|1603

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9M0P|1|S2|C|1532
9M0P|1|S2|A|1533
9M0P|1|S2|C|1534
9M0P|1|S2|U|1535
9M0P|1|S2|G|1536
*
9M0P|1|S2|C|1597
9M0P|1|S2|G|1598
9M0P|1|S2|U|1599
9M0P|1|S2|G|1600
9M0P|1|S2|A|1601
9M0P|1|S2|U|1602
9M0P|1|S2|G|1603
9M0P|1|S2|G|1604
*
9M0P|1|S2|C|1635
9M0P|1|S2|G|1636
9M0P|1|S2|A|1637
9M0P|1|S2|G|1638

Current chains

Chain S2

18S ribosomal RNA|HOMO SAPIENS

Nearby chains

Chain SF

40S ribosomal protein S5

Chain ST

40S ribosomal protein S19

Chain SZ

40S ribosomal protein S25