J3_9MM6_003

3D structure

PDB id

9MM6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

ROOLefa-octamer-wild type

Experimental method

ELECTRON MICROSCOPY

Resolution

2.94 Å

Loop

Sequence

UGACAAUAGACGC*GAAUAAU*AAAACUCAAACCAAG

Length

35 nucleotides

Bulged bases

9MM6|1|I|C|217

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MM6|1|I|U|214
9MM6|1|I|G|215
9MM6|1|I|A|216
9MM6|1|I|C|217
9MM6|1|I|A|218
9MM6|1|I|A|219
9MM6|1|I|U|220
9MM6|1|I|A|221
9MM6|1|I|G|222
9MM6|1|I|A|223
9MM6|1|I|C|224
9MM6|1|I|G|225
9MM6|1|I|C|226
*
9MM6|1|I|G|236
9MM6|1|I|A|237
9MM6|1|I|A|238
9MM6|1|I|U|239
9MM6|1|I|A|240
9MM6|1|I|A|241
9MM6|1|I|U|242
*
9MM6|1|I|A|283
9MM6|1|I|A|284
9MM6|1|I|A|285
9MM6|1|I|A|286
9MM6|1|I|C|287
9MM6|1|I|U|288
9MM6|1|I|C|289
9MM6|1|I|A|290
9MM6|1|I|A|291
9MM6|1|I|A|292
9MM6|1|I|C|293
9MM6|1|I|C|294
9MM6|1|I|A|295
9MM6|1|I|A|296
9MM6|1|I|G|297

Current chains

Chain I

RNA (526-MER)

Nearby chains

Chain A

ROOL RNA

Chain M

ROOL RNA