J3_9MNC_003
3D structure
- PDB id
- 9MNC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 80S ribosome bound to small molecule SW393071
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.33 Å
Loop
- Sequence
- CUCG*CGAUAGUCAACAAGUAC*GGAAAG
- Length
- 27 nucleotides
- Bulged bases
- 9MNC|1|L1|C|23, 9MNC|1|L5|U|354, 9MNC|1|L5|A|362
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9MNC|1|L1|C|21
9MNC|1|L1|U|22
9MNC|1|L1|C|23
9MNC|1|L1|G|24
*
9MNC|1|L5|C|351
9MNC|1|L5|G|352
9MNC|1|L5|A|353
9MNC|1|L5|U|354
9MNC|1|L5|A|355
9MNC|1|L5|G|356
9MNC|1|L5|U|357
9MNC|1|L5|C|358
9MNC|1|L5|A|359
9MNC|1|L5|A|360
9MNC|1|L5|C|361
9MNC|1|L5|A|362
9MNC|1|L5|A|363
9MNC|1|L5|G|364
9MNC|1|L5|U|365
9MNC|1|L5|A|366
9MNC|1|L5|C|367
*
9MNC|1|L5|G|374
9MNC|1|L5|G|375
9MNC|1|L5|A|376
9MNC|1|L5|A|377
9MNC|1|L5|A|378
9MNC|1|L5|G|379
Current chains
- Chain L1
- 5.8S rRNA
- Chain L5
- 28S rRNA
Nearby chains
- Chain LC
- Large ribosomal subunit protein uL4
- Chain LE
- Large ribosomal subunit protein uL24
- Chain LP
- Large ribosomal subunit protein eL37
- Chain LU
- Large ribosomal subunit protein eL39
Coloring options: