J3_9MNC_013
3D structure
- PDB id
- 9MNC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 80S ribosome bound to small molecule SW393071
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.33 Å
Loop
- Sequence
- GAAG*CC(A2M)UAUC*GUC
- Length
- 14 nucleotides
- Bulged bases
- 9MNC|1|L5|U|2788, 9MNC|1|L5|A|2789
- QA status
- Modified nucleotides: A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9MNC|1|L5|G|2402
9MNC|1|L5|A|2403
9MNC|1|L5|A|2404
9MNC|1|L5|G|2405
*
9MNC|1|L5|C|2785
9MNC|1|L5|C|2786
9MNC|1|L5|A2M|2787
9MNC|1|L5|U|2788
9MNC|1|L5|A|2789
9MNC|1|L5|U|2790
9MNC|1|L5|C|2791
*
9MNC|1|L5|G|2800
9MNC|1|L5|U|2801
9MNC|1|L5|C|2802
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LP
- Large ribosomal subunit protein eL37
- Chain LU
- Large ribosomal subunit protein eL39
- Chain Lg
- Large ribosomal subunit protein eL34
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