J3_9MOR_026

3D structure

PDB id

9MOR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Damaged 70S ribosome with PrfH bound

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

CUUG*CAG*CUUACG

Length

13 nucleotides

Bulged bases

9MOR|1|2|U|992, 9MOR|1|2|C|1214

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_9MOR_026 not in the Motif Atlas

Homologous match to J3_4LFB_005

Geometric discrepancy: 0.4524

The information below is about J3_4LFB_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_84394.1

Basepair signature

cWW-tWH-F-F-cWW-F-cWW-F

Number of instances in this motif group

2

Unit IDs

9MOR|1|2|C|990
9MOR|1|2|U|991
9MOR|1|2|U|992
9MOR|1|2|G|993
*
9MOR|1|2|C|1045
9MOR|1|2|A|1046
9MOR|1|2|G|1047
*
9MOR|1|2|C|1210
9MOR|1|2|U|1211
9MOR|1|2|U|1212
9MOR|1|2|A|1213
9MOR|1|2|C|1214
9MOR|1|2|G|1215

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain A

Peptide chain release factor H

Chain s

Small ribosomal subunit protein uS14