J3_9N70_006

3D structure

PDB id

9N70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

SSU processome maturation and disassembly, State E

Experimental method

ELECTRON MICROSCOPY

Resolution

5.17 Å

Loop

Sequence

CCAG*CUAGUAA*UGAUUACG

Length

19 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9N70|1|L1|C|1161
9N70|1|L1|C|1162
9N70|1|L1|A|1163
9N70|1|L1|G|1164
*
9N70|1|L1|C|1581
9N70|1|L1|U|1582
9N70|1|L1|A|1583
9N70|1|L1|G|1584
9N70|1|L1|U|1585
9N70|1|L1|A|1586
9N70|1|L1|A|1587
*
9N70|1|L1|U|1609
9N70|1|L1|G|1610
9N70|1|L1|A|1611
9N70|1|L1|U|1612
9N70|1|L1|U|1613
9N70|1|L1|A|1614
9N70|1|L1|C|1615
9N70|1|L1|G|1616

Current chains

Chain L1

18S rRNA

Nearby chains

Chain L5

40S ribosomal protein S5

Chain LC

40S ribosomal protein S16-A

Chain LG

40S ribosomal protein S28-A

Chain LO

Periodic tryptophan protein 2

Chain SM

U3 small nucleolar ribonucleoprotein protein IMP4