3D structure

PDB id
9N74 (explore in PDB, NAKB, or RNA 3D Hub)
Description
SSU processome maturation and disassembly, State H
Experimental method
ELECTRON MICROSCOPY
Resolution
2.65 Å

Loop

Sequence
AUCA*UAACUACUG*CAUUU
Length
18 nucleotides
Bulged bases
9N74|1|L1|C|934
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9N74|1|L1|A|881
9N74|1|L1|U|882
9N74|1|L1|C|883
9N74|1|L1|A|884
*
9N74|1|L1|U|928
9N74|1|L1|A|929
9N74|1|L1|A|930
9N74|1|L1|C|931
9N74|1|L1|U|932
9N74|1|L1|A|933
9N74|1|L1|C|934
9N74|1|L1|U|935
9N74|1|L1|G|936
*
9N74|1|L1|C|943
9N74|1|L1|A|944
9N74|1|L1|U|945
9N74|1|L1|U|946
9N74|1|L1|U|947

Current chains

Chain L1
18S rRNA

Nearby chains

Chain LW
U3 small nucleolar RNA-associated protein 7
Chain NF
40S ribosomal protein S13
Chain NG
40S ribosomal protein S14-A
Chain NM
Small ribosomal subunit protein eS1A
Chain SW
Pre-rRNA-processing protein PNO1

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.0986 s