3D structure

PDB id
9N75 (explore in PDB, NAKB, or RNA 3D Hub)
Description
SSU processome maturation and disassembly, State I
Experimental method
ELECTRON MICROSCOPY
Resolution
3.01 Å

Loop

Sequence
AUCA*UAACUACUG*CAUUU
Length
18 nucleotides
Bulged bases
9N75|1|L1|C|934
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9N75|1|L1|A|881
9N75|1|L1|U|882
9N75|1|L1|C|883
9N75|1|L1|A|884
*
9N75|1|L1|U|928
9N75|1|L1|A|929
9N75|1|L1|A|930
9N75|1|L1|C|931
9N75|1|L1|U|932
9N75|1|L1|A|933
9N75|1|L1|C|934
9N75|1|L1|U|935
9N75|1|L1|G|936
*
9N75|1|L1|C|943
9N75|1|L1|A|944
9N75|1|L1|U|945
9N75|1|L1|U|946
9N75|1|L1|U|947

Current chains

Chain L1
18S rRNA

Nearby chains

Chain LW
U3 small nucleolar RNA-associated protein 7
Chain NF
40S ribosomal protein S13
Chain NG
40S ribosomal protein S14-A
Chain NM
Small ribosomal subunit protein eS1A
Chain SW
Pre-rRNA-processing protein PNO1

Coloring options:

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