3D structure

PDB id
9N75 (explore in PDB, NAKB, or RNA 3D Hub)
Description
SSU processome maturation and disassembly, State I
Experimental method
ELECTRON MICROSCOPY
Resolution
3.01 Å

Loop

Sequence
CCAG*CUAGUAA*UGAUUACG
Length
19 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9N75|1|L1|C|1161
9N75|1|L1|C|1162
9N75|1|L1|A|1163
9N75|1|L1|G|1164
*
9N75|1|L1|C|1581
9N75|1|L1|U|1582
9N75|1|L1|A|1583
9N75|1|L1|G|1584
9N75|1|L1|U|1585
9N75|1|L1|A|1586
9N75|1|L1|A|1587
*
9N75|1|L1|U|1609
9N75|1|L1|G|1610
9N75|1|L1|A|1611
9N75|1|L1|U|1612
9N75|1|L1|U|1613
9N75|1|L1|A|1614
9N75|1|L1|C|1615
9N75|1|L1|G|1616

Current chains

Chain L1
18S rRNA

Nearby chains

Chain L5
40S ribosomal protein S5
Chain LC
40S ribosomal protein S16-A
Chain LG
40S ribosomal protein S28-A
Chain LO
Periodic tryptophan protein 2
Chain SM
U3 small nucleolar ribonucleoprotein protein IMP4

Coloring options:

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