J3_9N76_005

3D structure

PDB id

9N76 (explore in PDB, NAKB, or RNA 3D Hub)

Description

SSU processome maturation and disassembly, State J

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

AUCA*UAACUACUG*CAUUU

Length

18 nucleotides

Bulged bases

9N76|1|L1|C|934

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9N76|1|L1|A|881
9N76|1|L1|U|882
9N76|1|L1|C|883
9N76|1|L1|A|884
*
9N76|1|L1|U|928
9N76|1|L1|A|929
9N76|1|L1|A|930
9N76|1|L1|C|931
9N76|1|L1|U|932
9N76|1|L1|A|933
9N76|1|L1|C|934
9N76|1|L1|U|935
9N76|1|L1|G|936
*
9N76|1|L1|C|943
9N76|1|L1|A|944
9N76|1|L1|U|945
9N76|1|L1|U|946
9N76|1|L1|U|947

Current chains

Chain L1

18S rRNA

Nearby chains

Chain NF

40S ribosomal protein S13

Chain NG

40S ribosomal protein S14-A

Chain NM

Small ribosomal subunit protein eS1A

Chain SS

U3 small nucleolar RNA-associated protein 14

Chain SW

Pre-rRNA-processing protein PNO1