J3_9N9J_004
3D structure
- PDB id
- 9N9J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a GRP94 folding intermediate engaged with a CCDC134- and FKBP11-bound secretory translocon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UUGAAAAGAAC*GAGUUCAAGAGGGCG*CA
- Length
- 28 nucleotides
- Bulged bases
- 9N9J|1|L5|G|409, 9N9J|1|L5|G|413
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9N9J|1|L5|U|380
9N9J|1|L5|U|381
9N9J|1|L5|G|382
9N9J|1|L5|A|383
9N9J|1|L5|A|384
9N9J|1|L5|A|385
9N9J|1|L5|A|386
9N9J|1|L5|G|387
9N9J|1|L5|A|388
9N9J|1|L5|A|389
9N9J|1|L5|C|390
*
9N9J|1|L5|G|401
9N9J|1|L5|A|402
9N9J|1|L5|G|403
9N9J|1|L5|U|404
9N9J|1|L5|U|405
9N9J|1|L5|C|406
9N9J|1|L5|A|407
9N9J|1|L5|A|408
9N9J|1|L5|G|409
9N9J|1|L5|A|410
9N9J|1|L5|G|411
9N9J|1|L5|G|412
9N9J|1|L5|G|413
9N9J|1|L5|C|414
9N9J|1|L5|G|415
*
9N9J|1|L8|C|19
9N9J|1|L8|A|20
Current chains
- Chain L5
- 28S ribosomal RNA
- Chain L8
- 5.8S ribosomal RNA
Nearby chains
- Chain A
- Peptidyl-prolyl cis-trans isomerase FKBP11
- Chain D
- Protein transport protein Sec61 subunit alpha isoform 1
- Chain I
- Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A
- Chain LC
- Large ribosomal subunit protein uL4
- Chain LP
- Large ribosomal subunit protein uL22
- Chain LY
- Large ribosomal subunit protein uL24
- Chain Ll
- Large ribosomal subunit protein eL39
- Chain y3
- Endoplasmin
Coloring options: