J3_9N9J_007

3D structure

PDB id

9N9J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a GRP94 folding intermediate engaged with a CCDC134- and FKBP11-bound secretory translocon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGAACUA*UAG*CGAA

Length

14 nucleotides

Bulged bases

9N9J|1|L5|A|1534, 9N9J|1|L5|G|1641, 9N9J|1|L5|A|1642

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9N9J|1|L5|U|1531
9N9J|1|L5|G|1532
9N9J|1|L5|A|1533
9N9J|1|L5|A|1534
9N9J|1|L5|C|1535
9N9J|1|L5|U|1536
9N9J|1|L5|A|1537
*
9N9J|1|L5|U|1622
9N9J|1|L5|A|1623
9N9J|1|L5|G|1624
*
9N9J|1|L5|C|1640
9N9J|1|L5|G|1641
9N9J|1|L5|A|1642
9N9J|1|L5|A|1643

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LA

60S ribosomal protein L8

Chain LN

Large ribosomal subunit protein eL15

Chain Lj

Large ribosomal subunit protein eL37