J3_9N9J_018

3D structure

PDB id

9N9J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a GRP94 folding intermediate engaged with a CCDC134- and FKBP11-bound secretory translocon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUC*GCCUCACGAUCC*GGUGUC

Length

21 nucleotides

Bulged bases

9N9J|1|L5|U|4374

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9N9J|1|L5|G|4228
9N9J|1|L5|U|4229
9N9J|1|L5|C|4230
*
9N9J|1|L5|G|4331
9N9J|1|L5|C|4332
9N9J|1|L5|C|4333
9N9J|1|L5|U|4334
9N9J|1|L5|C|4335
9N9J|1|L5|A|4336
9N9J|1|L5|C|4337
9N9J|1|L5|G|4338
9N9J|1|L5|A|4339
9N9J|1|L5|U|4340
9N9J|1|L5|C|4341
9N9J|1|L5|C|4342
*
9N9J|1|L5|G|4370
9N9J|1|L5|G|4371
9N9J|1|L5|U|4372
9N9J|1|L5|G|4373
9N9J|1|L5|U|4374
9N9J|1|L5|C|4375

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LQ

Large ribosomal subunit protein eL18

Chain LT

Large ribosomal subunit protein eL21

Chain La

60S ribosomal protein L27a

Chain Lo

Large ribosomal subunit protein eL42

Chain v3

Transfer RNA; tRNA