J3_9N9J_020

3D structure

PDB id

9N9J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a GRP94 folding intermediate engaged with a CCDC134- and FKBP11-bound secretory translocon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UAUC*GUU*ACUAAUA

Length

14 nucleotides

Bulged bases

9N9J|1|L5|A|4464, 9N9J|1|L5|U|4465

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9N9J|1|L5|U|4463
9N9J|1|L5|A|4464
9N9J|1|L5|U|4465
9N9J|1|L5|C|4466
*
9N9J|1|L5|G|4491
9N9J|1|L5|U|4492
9N9J|1|L5|U|4493
*
9N9J|1|L5|A|4507
9N9J|1|L5|C|4508
9N9J|1|L5|U|4509
9N9J|1|L5|A|4510
9N9J|1|L5|A|4511
9N9J|1|L5|U|4512
9N9J|1|L5|A|4513

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LB

60S ribosomal protein L3

Chain LV

Large ribosomal subunit protein uL14