J3_9NDP_007
3D structure
- PDB id
- 9NDP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of stalled ribosome and nascent chain in complex with NMT2 and NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- UCC*GCCGGG*CCACGCG
- Length
- 16 nucleotides
- Bulged bases
- 9NDP|1|5|C|1237, 9NDP|1|5|G|1271, 9NDP|1|5|C|1272
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9NDP|1|5|U|982
9NDP|1|5|C|983
9NDP|1|5|C|984
*
9NDP|1|5|G|1070
9NDP|1|5|C|1071
9NDP|1|5|C|1072
9NDP|1|5|G|1073
9NDP|1|5|G|1074
9NDP|1|5|G|1075
*
9NDP|1|5|C|1236
9NDP|1|5|C|1237
9NDP|1|5|A|1238
9NDP|1|5|C|1239
9NDP|1|5|G|1271
9NDP|1|5|C|1272
9NDP|1|5|G|1273
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain C
- 60S ribosomal protein L4
- Chain E
- 60S ribosomal protein L6
- Chain F
- Large ribosomal subunit protein uL30
- Chain b
- Large ribosomal subunit protein eL29
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