J3_9NDP_021

3D structure

PDB id

9NDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of stalled ribosome and nascent chain in complex with NMT2 and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

UAUC*GUU*ACUAAUA

Length

14 nucleotides

Bulged bases

9NDP|1|5|A|4464, 9NDP|1|5|U|4465

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NDP|1|5|U|4463
9NDP|1|5|A|4464
9NDP|1|5|U|4465
9NDP|1|5|C|4466
*
9NDP|1|5|G|4491
9NDP|1|5|U|4492
9NDP|1|5|U|4493
*
9NDP|1|5|A|4507
9NDP|1|5|C|4508
9NDP|1|5|U|4509
9NDP|1|5|A|4510
9NDP|1|5|A|4511
9NDP|1|5|U|4512
9NDP|1|5|A|4513

Current chains

Chain 5

28S rRNA

Nearby chains

Chain B

Ribosomal protein L3

Chain V

Ribosomal protein L23