J3_9NJV_028

3D structure

PDB id

9NJV (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S initiation complex (bL33 absent)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UCUUGACAU*ACAG*CUUACGA

Length

20 nucleotides

Bulged bases

9NJV|1|R3|U|1212, 9NJV|1|R3|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NJV|1|R3|U|989
9NJV|1|R3|C|990
9NJV|1|R3|U|991
9NJV|1|R3|U|992
9NJV|1|R3|G|993
9NJV|1|R3|A|994
9NJV|1|R3|C|995
9NJV|1|R3|A|996
9NJV|1|R3|U|997
*
9NJV|1|R3|A|1044
9NJV|1|R3|C|1045
9NJV|1|R3|A|1046
9NJV|1|R3|G|1047
*
9NJV|1|R3|C|1210
9NJV|1|R3|U|1211
9NJV|1|R3|U|1212
9NJV|1|R3|A|1213
9NJV|1|R3|C|1214
9NJV|1|R3|G|1215
9NJV|1|R3|A|1216

Current chains

Chain R3

16S ribosomal RNA

Nearby chains

Chain sn

Small ribosomal subunit protein uS14