J3_9NO7_031

3D structure

PDB id

9NO7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site 2'-deoxy-A76-fMEAAAKC-peptidyl-tRNAcys at 2.13A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.13 Å

Loop

Sequence

GGAAC*GGUGC*GAGCC

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NO7|1|a|G|1002
9NO7|1|a|G|1003
9NO7|1|a|A|1004
9NO7|1|a|A|1005
9NO7|1|a|C|1006
*
9NO7|1|a|G|1023
9NO7|1|a|G|1024
9NO7|1|a|U|1025
9NO7|1|a|G|1026
9NO7|1|a|C|1027
*
9NO7|1|a|G|1034
9NO7|1|a|A|1035
9NO7|1|a|G|1036
9NO7|1|a|C|1037
9NO7|1|a|C|1038

Current chains

Chain a

16S Ribosomal RNA

Nearby chains