3D structure

PDB id
9O2X (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of WT E.coli ribosome 70S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site (S)-betahydroxyBocK charged NH-tRNAPyl
Experimental method
ELECTRON MICROSCOPY
Resolution
2.29 Å

Loop

Sequence
UA*UACCGGUGG*CGG
Length
14 nucleotides
Bulged bases
9O2X|1|A|U|723
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9O2X|1|A|U|672
9O2X|1|A|A|673
*
9O2X|1|A|U|717
9O2X|1|A|A|718
9O2X|1|A|C|719
9O2X|1|A|C|720
9O2X|1|A|G|721
9O2X|1|A|G|722
9O2X|1|A|U|723
9O2X|1|A|G|724
9O2X|1|A|G|725
*
9O2X|1|A|C|732
9O2X|1|A|G|733
9O2X|1|A|G|734

Current chains

Chain A
16S rRNA

Nearby chains

Chain F
Small ribosomal subunit protein bS6
Chain K
Small ribosomal subunit protein uS11
Chain O
Small ribosomal subunit protein uS15
Chain R
Small ribosomal subunit protein bS18
Chain U
Small ribosomal subunit protein bS21
Chain c
50S ribosomal protein L2

Coloring options:

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