J3_9O2Y_014
3D structure
- PDB id
- 9O2Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of WT E.coli ribosome 70S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site (R) beta-2-hydroxy-BocLysine acid charged NH-tRNAPyl
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.14 Å
Loop
- Sequence
- UAU*AGAC*GGUG
- Length
- 11 nucleotides
- Bulged bases
- 9O2Y|1|A|U|1183
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9O2Y_014 not in the Motif Atlas
- Geometric match to J3_8B0X_012
- Geometric discrepancy: 0.2224
- The information below is about J3_8B0X_012
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_82365.6
- Basepair signature
- cWW-F-cWW-cWW-F-F
- Number of instances in this motif group
- 5
Unit IDs
9O2Y|1|A|U|1116
9O2Y|1|A|A|1117
9O2Y|1|A|U|1118
*
9O2Y|1|A|A|1155
9O2Y|1|A|G|1156
9O2Y|1|A|A|1157
9O2Y|1|A|C|1158
*
9O2Y|1|A|G|1181
9O2Y|1|A|G|1182
9O2Y|1|A|U|1183
9O2Y|1|A|G|1184
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain B
- 30S ribosomal protein S2
- Chain G
- Small ribosomal subunit protein uS7
- Chain I
- Small ribosomal subunit protein uS9
- Chain J
- Small ribosomal subunit protein uS10
- Chain N
- Small ribosomal subunit protein uS14
Coloring options: