J3_9OFV_015
3D structure
- PDB id
- 9OFV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Consensus reconstruction of the eukaryotic Ribosome-associated Quality Control complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.16 Å
Loop
- Sequence
- AGAUGG*CGUUUCAAAG*CACCAU
- Length
- 22 nucleotides
- Bulged bases
- 9OFV|1|f|C|1556, 9OFV|1|f|A|1558
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9OFV|1|f|A|1537
9OFV|1|f|G|1538
9OFV|1|f|A|1539
9OFV|1|f|U|1540
9OFV|1|f|G|1541
9OFV|1|f|G|1542
*
9OFV|1|f|C|1551
9OFV|1|f|G|1552
9OFV|1|f|U|1553
9OFV|1|f|U|1554
9OFV|1|f|U|1555
9OFV|1|f|C|1556
9OFV|1|f|A|1557
9OFV|1|f|A|1558
9OFV|1|f|A|1559
9OFV|1|f|G|1560
*
9OFV|1|f|C|1579
9OFV|1|f|A|1580
9OFV|1|f|C|1581
9OFV|1|f|C|1582
9OFV|1|f|A|1583
9OFV|1|f|U|1584
Current chains
- Chain f
- 25S rRNA
Nearby chains
- Chain W
- 60S ribosomal protein L37-A
- Chain b0
- 60S ribosomal protein L25
- Chain i
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain j
- 60S ribosomal protein L2-A
- Chain p
- 60S ribosomal protein L8-A
Coloring options: