3D structure

PDB id
9OJM (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human mitochondrial 28S PIC with tRNA and mtIF2
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
CUCU*ACCCCAG*CAAG
Length
15 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9OJM|1|A|C|677
9OJM|1|A|U|678
9OJM|1|A|C|679
9OJM|1|A|U|680
*
9OJM|1|A|A|866
9OJM|1|A|C|867
9OJM|1|A|C|868
9OJM|1|A|C|869
9OJM|1|A|C|870
9OJM|1|A|A|871
9OJM|1|A|G|872
*
9OJM|1|A|C|917
9OJM|1|A|A|918
9OJM|1|A|A|919
9OJM|1|A|G|920

Current chains

Chain A
12S mitochondrial RNA

Nearby chains

Chain 7
Translation initiation factor IF-2, mitochondrial
Chain J
28S ribosomal protein S12, mitochondrial
Chain O
28S ribosomal protein S18b, mitochondrial

Coloring options:

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