J3_9P73_017

3D structure

PDB id

9P73 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human eEF2-A/P-P/E state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

9P73|1|L5|U|2763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P73|1|L5|A|2551
9P73|1|L5|G|2552
9P73|1|L5|A|2553
9P73|1|L5|U|2554
9P73|1|L5|G|2555
*
9P73|1|L5|C|2572
9P73|1|L5|A|2573
9P73|1|L5|G|2574
9P73|1|L5|U|2575
*
9P73|1|L5|A|2757
9P73|1|L5|G|2758
9P73|1|L5|G|2759
9P73|1|L5|G|2760
9P73|1|L5|U|2761
9P73|1|L5|G|2762
9P73|1|L5|U|2763
9P73|1|L5|A|2764
9P73|1|L5|A|2765
9P73|1|L5|A|2766
9P73|1|L5|U|2767

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LZ

60S ribosomal protein L27