J3_9PJ7_022

3D structure

PDB id

9PJ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

C. acnes 70S ribosome bound to Doxycycline

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GUG*CGAGUAG*UGAAUC

Length

16 nucleotides

Bulged bases

9PJ7|1|a|U|324, 9PJ7|1|a|G|459

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PJ7|1|a|G|323
9PJ7|1|a|U|324
9PJ7|1|a|G|325
*
9PJ7|1|a|C|458
9PJ7|1|a|G|459
9PJ7|1|a|A|460
9PJ7|1|a|G|461
9PJ7|1|a|U|462
9PJ7|1|a|A|463
9PJ7|1|a|G|464
*
9PJ7|1|a|U|488
9PJ7|1|a|G|489
9PJ7|1|a|A|490
9PJ7|1|a|A|491
9PJ7|1|a|U|492
9PJ7|1|a|C|493

Current chains

Chain a

23S rRNA

Nearby chains

Chain w

50S ribosomal protein L28