J3_9PJ7_023

3D structure

PDB id

9PJ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

C. acnes 70S ribosome bound to Doxycycline

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UGUGGUUCU*AGGAUUGGCCAGUGAGAAAUG*CUGGUGUG

Length

38 nucleotides

Bulged bases

9PJ7|1|a|A|366, 9PJ7|1|a|U|447

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PJ7|1|a|U|333
9PJ7|1|a|G|334
9PJ7|1|a|U|335
9PJ7|1|a|G|336
9PJ7|1|a|G|337
9PJ7|1|a|U|338
9PJ7|1|a|U|339
9PJ7|1|a|C|340
9PJ7|1|a|U|341
*
9PJ7|1|a|A|350
9PJ7|1|a|G|351
9PJ7|1|a|G|352
9PJ7|1|a|A|353
9PJ7|1|a|U|354
9PJ7|1|a|U|355
9PJ7|1|a|G|356
9PJ7|1|a|G|357
9PJ7|1|a|C|358
9PJ7|1|a|C|359
9PJ7|1|a|A|360
9PJ7|1|a|G|361
9PJ7|1|a|U|362
9PJ7|1|a|G|363
9PJ7|1|a|A|364
9PJ7|1|a|G|365
9PJ7|1|a|A|366
9PJ7|1|a|A|367
9PJ7|1|a|A|368
9PJ7|1|a|U|369
9PJ7|1|a|G|370
*
9PJ7|1|a|C|441
9PJ7|1|a|U|442
9PJ7|1|a|G|443
9PJ7|1|a|G|444
9PJ7|1|a|U|445
9PJ7|1|a|G|446
9PJ7|1|a|U|447
9PJ7|1|a|G|448

Current chains

Chain a

23S rRNA

Nearby chains