J3_9PR4_002
3D structure
- PDB id
- 9PR4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In Situ Structure of the Human Mitochondrial Large Subunit 39S in Complex with TACO1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.77 Å
Loop
- Sequence
- CCAAACCCACUCCACCUUACUACCAGACAACCUUAGCCA*UUACCCAAAUA*UUGAAACCUG
- Length
- 60 nucleotides
- Bulged bases
- 9PR4|1|A|C|1699, 9PR4|1|A|U|1701, 9PR4|1|A|C|1707, 9PR4|1|A|A|1708, 9PR4|1|A|C|1715, 9PR4|1|A|U|1716, 9PR4|1|A|A|1735, 9PR4|1|A|C|1764
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9PR4|1|A|C|1684
9PR4|1|A|C|1685
9PR4|1|A|A|1686
9PR4|1|A|A|1687
9PR4|1|A|A|1688
9PR4|1|A|C|1689
9PR4|1|A|C|1690
9PR4|1|A|C|1691
9PR4|1|A|A|1692
9PR4|1|A|C|1693
9PR4|1|A|U|1694
9PR4|1|A|C|1695
9PR4|1|A|C|1696
9PR4|1|A|A|1697
9PR4|1|A|C|1698
9PR4|1|A|C|1699
9PR4|1|A|U|1700
9PR4|1|A|U|1701
9PR4|1|A|A|1702
9PR4|1|A|C|1703
9PR4|1|A|U|1704
9PR4|1|A|A|1705
9PR4|1|A|C|1706
9PR4|1|A|C|1707
9PR4|1|A|A|1708
9PR4|1|A|G|1709
9PR4|1|A|A|1710
9PR4|1|A|C|1711
9PR4|1|A|A|1712
9PR4|1|A|A|1713
9PR4|1|A|C|1714
9PR4|1|A|C|1715
9PR4|1|A|U|1716
9PR4|1|A|U|1717
9PR4|1|A|A|1718
9PR4|1|A|G|1719
9PR4|1|A|C|1720
9PR4|1|A|C|1721
9PR4|1|A|A|1722
*
9PR4|1|A|U|1729
9PR4|1|A|U|1730
9PR4|1|A|A|1731
9PR4|1|A|C|1732
9PR4|1|A|C|1733
9PR4|1|A|C|1734
9PR4|1|A|A|1735
9PR4|1|A|A|1736
9PR4|1|A|A|1737
9PR4|1|A|U|1738
9PR4|1|A|A|1739
*
9PR4|1|A|U|1758
9PR4|1|A|U|1759
9PR4|1|A|G|1760
9PR4|1|A|A|1761
9PR4|1|A|A|1762
9PR4|1|A|A|1763
9PR4|1|A|C|1764
9PR4|1|A|C|1765
9PR4|1|A|U|1766
9PR4|1|A|G|1767
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 2
- 39S ribosomal protein L34, mitochondrial
- Chain 3
- 39S ribosomal protein L35, mitochondrial
- Chain 5
- 39S ribosomal protein L37, mitochondrial
- Chain 9
- 39S ribosomal protein L41, mitochondrial
- Chain F
- 39S ribosomal protein L4, mitochondrial
- Chain H
- 39S ribosomal protein L9, mitochondrial
- Chain M
- 39S ribosomal protein L15, mitochondrial
- Chain OX
- Mitochondrial inner membrane protein OXA1L
- Chain U
- 39S ribosomal protein L23, mitochondrial
- Chain V
- 39S ribosomal protein L24, mitochondrial
- Chain X
- 39S ribosomal protein L28, mitochondrial
- Chain Y
- 39S ribosomal protein L47, mitochondrial
- Chain i
- 39S ribosomal protein L51, mitochondrial
- Chain q
- Growth arrest and DNA damage-inducible proteins-interacting protein 1
Coloring options: