J3_9Q2M_035
3D structure
- PDB id
- 9Q2M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit ribosomal 80S elongation complex with eEF2, partial P site Ala-tRNA, E site Ala-tRNA on NediV ORF
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- UCUUAG*CGAGAC*GCAAUA
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9Q2M|1|9|U|1356
9Q2M|1|9|C|1357
9Q2M|1|9|U|1358
9Q2M|1|9|U|1359
9Q2M|1|9|A|1360
9Q2M|1|9|G|1361
*
9Q2M|1|9|C|1400
9Q2M|1|9|G|1401
9Q2M|1|9|A|1402
9Q2M|1|9|G|1403
9Q2M|1|9|A|1404
9Q2M|1|9|C|1405
*
9Q2M|1|9|G|1487
9Q2M|1|9|C|1488
9Q2M|1|9|A|1489
9Q2M|1|9|A|1490
9Q2M|1|9|U|1491
9Q2M|1|9|A|1492
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain CC
- 40S ribosomal protein S2
- Chain DD
- 40S ribosomal protein S3
- Chain QQ
- Small ribosomal subunit protein uS9
- Chain RR
- 40S ribosomal protein S17
- Chain UU
- 40S ribosomal protein S20
- Chain dd
- 40S ribosomal protein S29
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